Publications by Year: 1999

1999
Turner, L., Samuel, A.D.T., Stern, A.S. & Berg, H.C. Temperature Dependence of Switching of the Bacterial Flagellar Motor by the Protein CheY13DK106YW. Biophysical Journal 77, 1, 597-603 (1999). Publisher's VersionAbstract
The behavior of the bacterium Escherichia coli is controlled by switching of the flagellar rotary motor between the two rotational states, clockwise (CW) and counterclockwise (CCW). The molecular mechanism for switching remains unknown, but binding of the response regulator CheY-P to the motor component FliM enhances CW rotation. This effect is mimicked by the unphosphorylated double mutant CheY13DK106YW (CheY**). To learn more about switching, we measured the fraction of time that a motor spends in the CW state (the CW bias) at different concentrations of CheY** and at different temperatures. From the CW bias, we computed the standard free energy change of switching. In the absence of CheY, this free energy change is a linear function of temperature (Turner et al., 1996. Biophys. J. 71:2227–2233). In the presence of CheY**, it is nonlinear. However, the data can be fit by models in which binding of each molecule of CheY** shifts the difference in free energy between CW and CCW states by a fixed amount. The shift increases linearly from ∼0.3kT per molecule at 5°C to ∼0.9kT at 25°C, where k is Boltzmann's constant and T is 289 Kelvin (= 16°C). The entropy and enthalpy contributions to this shift are about −0.031kT/°C and 0.10kT, respectively.
turner_biophysical_1999.pdf
Samuel, A.D.T., et al. Flagellar determinants of bacterial sensitivity to χ-phage. Proceedings of the National Academy of Sciences 96, 17, 9863–9866 (1999). Publisher's VersionAbstract
Bacteriophage χ is known to infect motile strains of enteric bacteria by adsorbing randomly along the length of a flagellar filament and then injecting its DNA into the bacterial cell at the filament base. Here, we provide evidence for a “nut and bolt” model for translocation of phage along the filament: the tail fiber of χ fits the grooves formed by helical rows of flagellin monomers, and active flagellar rotation forces the phage to follow the grooves as a nut follows the threads of a bolt.
pnas_1999.pdf
Mahadevan, L., Ryu, W.S. & Samuel, A.D.T. Tumbling cards. Physics of Fluids 11, 1, 1-3 (1999). Publisher's VersionAbstract
When a stiff rectangular card is dropped in still air with its long axis horizontal, it often settles into a regular mode of motion; while revolving around its long axis it descends along a path that is inclined to the vertical at a nearly constant angle. We show experimentally that the tumbling frequency Omega of a card of length \(l\), width \(w\) and thickness \(d (l≫w≫d)(l≫w≫d)\) scales as Omega ~ d1/2w-1, consistent with a simple dimensional argument that balances the drag against gravity.
physics_of_fluids_1999.pdf